| 1 |
ALMANSOUR A M， ALHADLAQ M A， ALZAHRANI K O， et al.The silent threat： Antimicrobial-resistant pathogens in food-producing animals and their impact on public health［J］. Microorganisms， 2023，11（9）： 2127.
|
| 2 |
REYNOLDS J L， TRUDEAU R E， SEVILLE M T， et al. Impact of a Vancomycin-resistant Enterococcus （VRE） screening result on appropriateness of antibiotic therapy［J］. Antimicrobial stewardship &healthcare epidemiology， 2021， 1（1）： e41.
|
| 3 |
LOHIKOSKI R， OLDBERG K， RASMUSSEN M. Bacteraemia caused by non-faecalis and non-faecium Enterococcus species-a retrospective study of incidence， focus of infection， and prognosis［J］.European journal of clinical microbiology & infectious diseases：Official publication of the European society of clinical microbiology，2024， 43（1）： 45-53.
|
| 4 |
FREITAS A R， PEREIRA A P， NOVAIS C， et al. Multidrug-resistant high-risk Enterococcus faecium clones： Can we really define them？［J］.International journal of antimicrobial agents， 2021， 57（1）： 106227.
|
| 5 |
MULANI M S， KAMBLE E E， KUMKAR S N， et al. Emerging strategies to combat ESKAPE pathogens in the era of antimicrobial resistance： A review［J］. Frontiers in microbiology， 2019， 10： 539.
|
| 6 |
COLOMB-COTINAT M， SOING-ALTRACH S， LEON A， et al.Emerging extensively drug-resistant bacteria （eXDR） in France in 2018［J］. Médecine et maladies infectieuses， 2020， 50（8）： 715-722.
|
| 7 |
HYATT D， CHEN G L， LOCASCIO P F， et al. Prodigal： Prokaryotic gene recognition and translation initiation site identification［J］. BMC bioinformatics， 2010， 11： 119.
|
| 8 |
GUREVICH A， SAVELIEV V， VYAHHI N， et al. QUAST： Quality assessment tool for genome assemblies［J］. Bioinformatics， 2013，29（8）： 1072-1075.
|
| 9 |
CHEN M Y， TENG W K， ZHAO L， et al. Comparative genomics reveals insights into cyanobacterial evolution and habitat adaptation［J］.The ISME journal， 2021， 15（1）： 211-227.
|
| 10 |
SHARIFZADEH PEYVASTI V， MOHABATI MOBAREZ A，SHAHCHERAGHI F， et al. High-level aminoglycoside resistance and distribution of aminoglycoside resistance genes among Enterococcus spp. clinical isolates in Tehran， Iran［J］. Journal of global antimicrobial resistance， 2020， 20： 318-323.
|
| 11 |
SIMJEE S， FRAISE A P， GILL M J. Plasmid heterogeneity and identification of a Tn5281-like element in clinical isolates of highlevel gentamicin-resistant Enterococcus faecium isolated in the UK［J］.The journal of antimicrobial chemotherapy， 1999， 43（5）： 625-635.
|
| 12 |
WANG S， GUO Y， LV J， et al. Characteristic of Enterococcus faecium clinical isolates with quinupristin/dalfopristin resistance in China［J］.BMC microbiology， 2016， 16（1）： 246.
|
| 13 |
STEFANSKA I， KWIECIEN E， JOZWIAK-PIASECKA K， et al.Antimicrobial susceptibility of lactic acid bacteria strains of potential use as feed additives-the basic safety and usefulness criterion［J］.Frontiers in veterinary science， 2021， 8： 687071.
|
| 14 |
AMUASI G R， DSANI E， OWUSU-NYANTAKYI C， et al.Enterococcus species： Insights into antimicrobial resistance and wholegenome features of isolates recovered from livestock and raw meat in Ghana［J］. Frontiers in microbiology， 2023， 14： 1254896.
|
| 15 |
EL JENI R， GHEDIRA K， EL BOUR M， et al. High-quality genome sequence assembly of R.A73 Enterococcus faecium isolated from freshwater fish mucus［J］. BMC microbiology， 2020， 20（1）： 322.
|
| 16 |
EMANEINI M， KHORAMIAN B， JABALAMELI F， et al. Prevalence of high-level gentamicin-resistant Enterococcus faecalis and Enterococcus faecium in an Iranian hospital［J］. Journal of preventive medicine and hygiene， 2016， 57（4）： E197-E200.
|
| 17 |
MORRONI G， DI CESARE A， DI SANTE L， et al. Enterococcus faecium ST17 from coastal marine sediment carrying transferable multidrug resistance plasmids［J］. Microbial drug resistance：mechanisms， epidemiology， and disease， 2016， 22（7）： 523-530.
|
| 18 |
VALDEZATE S， MIRANDA C， NAVARRO A， et al. Clonal outbreak of ST17 multidrug-resistant Enterococcus faecium harbouring an Inc18-like： Tn1546 plasmid in a haemo-oncology ward of a Spanish hospital［J］. The journal of antimicrobial chemotherapy， 2012， 67（4）：832-836.
|
| 19 |
JOZEFIKOVA A， VALCEK A， SOLTYS K， et al. Persistence and multi-ward dissemination of Vancomycin-resistant Enterococcus faecium ST17 clone in hospital settings in Slovakia 2017-2020［J］.International journal of antimicrobial agents， 2022， 59（4）： 106561.
|
| 20 |
LOPEZ-URRUTIA L， DE FRUTOS M， OTEO J， et al. Vancomycinresistant Enterococcus faecium ST17 outbreak in a neonatal unit［J］.Enfermedades infecciosas y microbiologia clinica， 2018， 36（3）： 198-200.
|
| 21 |
MELEGH S， NYUL A， KOVÁCS K， et al. Dissemination of VanAtype Enterococcus faecium isolates in hungary［J］. Microbial drug resistance： mechanisms， epidemiology， and disease， 2018， 24（9）： 1376-1390.
|
| 22 |
YANG J Y， JIANG Y F， GUO L， et al. Prevalence of diverse clones of Vancomycin-resistant Enterococcus faecium ST78 in a Chinese hospital［J］. Microbial drug resistance： Mechanisms， epidemiology and disease， 2016， 22（4）： 294-300.
|
| 23 |
PERMANA B， HARRIS P N A， RUNNEGAR N， et al. Using genomics to investigate an outbreak of Vancomycin-resistant Enterococcus faecium ST78 at a large tertiary hospital in queensland［J］. Microbiology spectrum， 2023， 11（3）： e0420422.
|
| 24 |
WEBER A， MAECHLER F， SCHWAB F， et al. Increase of Vancomycin-resistant Enterococcus faecium strain type ST117 CT71 at Charité-Universitätsmedizin Berlin， 2008 to 2018［J］. Antimicrobial resistance and infection control， 2020， 9（1）： 109.
|
| 25 |
RODRIGUEZ-LUCAS C， FERNANDEZ J， RAYA C， et al.Establishment and persistence of glycopeptide-resistant Enterococcus faecium ST80 and ST117 clones within a health care facility located in a low-prevalence geographical region［J］. Microbial drug resistance：Mechanisms， epidemiology， and disease， 2022， 28（2）： 217-221.
|
| 26 |
WENG P L， RAMLI R， SHAMSUDIN M N， et al. High genetic diversity of Enterococcus faecium and Enterococcus faecalis clinical isolates by pulsed-field gel electrophoresis and multilocus sequence typing from a hospital in Malaysia［J］. BioMed research international，2013， 2013： 938937.
|
| 27 |
DOUGLAS A P， MARSHALL C， BAINES S L， et al. Utilizing genomic analyses to investigate the first outbreak of vanA Vancomycin-resistant Enterococcus in Australia with emergence of daptomycin non-susceptibility［J］. Journal of medical microbiology，2019， 68（3）： 303-308.
|
| 28 |
BELLO-LOPEZ J M， NOGUERON-SILVA J， CASTANEDASANCHEZ J I， et al. Molecular characterization of microbial contaminants isolated from umbilical cord blood units for transplant［J］.The Brazilian journal of infectious diseases： An official publication of the Brazilian society of infectious diseases， 2015， 19（6）： 571-577.
|
| 29 |
SREDNIK M E， ABATCHA M G， CHIAPPARRONE M L. Editorial：Antimicrobial resistance genomics in bacterial zoonotic pathogens［J］.Frontiers in genetics， 2023， 14： 1277081.
|
| 30 |
KANIA I， GOSPODAREK E， ULATOWSKA B. Analysis of the bacterial strains isolated from urine samples of hospitalized and ambulatory patients［J］. Medical science monitor： International medical journal of experimental and clinical research， 2000， 6（6）： 1122-1127.
|