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Chinese Journal of Clinical Laboratory Management(Electronic Edition) ›› 2020, Vol. 08 ›› Issue (01): 48-53. doi: 10.3877/cma.j.issn.2095-5820.2020.01.009

Special Issue:

• Laboratory Management • Previous Articles     Next Articles

Biobanking network construction with open source platform

Shiyi Zhou1, Yating Cheng1, Zhenjun Jiang1, Guoxue Wen1, Yong Liu1,()   

  1. 1. Guangzhou Kingmed Center for Clinical Laboratory, Guangzhou 510005, China
  • Received:2019-09-22 Online:2020-02-28 Published:2020-02-28
  • Contact: Yong Liu
  • About author:
    Corresponding author: Liu Yong, Email:

Abstract:

Objective

To study and locally construct a biobank database informaion management platform, so as to provide application solutions for the establishment of such platform in clinical research.

Methods

By building and promoting the localization of OpenSpecimen system and combining the systems’ features with external usage report, we discussed the network construction of the specimen information management system.

Results

A specimen information management platform with standardized, stable and systematic features was established to facilitate the progression of clinical research.

Conclusions

OpenSpecimen is an open source, free information management platform, developed and maintained by a professional team. It was featured by a streamlined process of collecting high quality standards-based data, using internationally established standards, such as Systematized Nomenclature of Medicine-Clinical Terms (SNOMED-CT), International Classification of Diseases (ICD), Logical Observation Identifiers Names and Codes (LOINC), etc. It also allowed users to customize standard coding system. As a result, it greatly improved the standardization of specimen information data collection, simplified the biobanking management process and established a common interface for clinical meta-data exchange between multiple biobanking sites.

Key words: Translational medicine, Biospecimen, Information management, Networking

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